I'm not seeing how it would be possible for your efficiency to stay the same or why you'd want the mash efficiency number to be the same even if you've already brewed like this and figured it up on paper.
It doesn't matter if BeerSmith's mash efficiency matches what you get on paper, what matters is that BeerSmith predicts your gravity using the correct batch size.
When I am backtracking over old recipes after entering the actual measurements I adjust the brewhouse efficiency until BeerSmith agrees on the predicted and actual gravity.
But if you absolutely insist that your mash efficiency matches either what you get on paper or what you get using one way or the other in spite of having BeerSmith correctly predict your gravities, once you have your correct losses entered adjust your brewhouse efficiency, the only place it can adjust is the mash efficiency.